BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E01LP1|AL426525
(572 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig153 586 e-167
>3x_Contig153
Length = 1175
Score = 586 bits (283), Expect = e-167
Identities = 288/293 (98%)
Strand = Plus / Minus
Query: 1 atgacaatggtgtacacctctcaaagtmattagaatccaggacttaatatctgctggact 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 536 atgacaatggtgtacacctctcaaagtcattagaatccaggacttaatatctgctggact 477
Query: 61 gaacataatagaagtgtccttaataatgatctccaagtcggcaggtagaaactccaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gaacataatagaagtgtccttaataatgatctccaagtcggcaggtagaaactccaacac 417
Query: 121 taaattcaaattatcgtttgccatgaaaacgtctactaattcaataacattcacatgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 taaattcaaattatcgtttgccatgaaaacgtctactaattcaataacattcacatgctt 357
Query: 181 caactcttgtagaaacttcacttcacgtaatgctgacatgtcaagtccawctttgaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 356 caactcttgtagaaacttcacttcacgtaatgctgacatgtcaagtccatctttgaactg 297
Query: 241 tgaggtcttgatctccttcaccgcmmtmctccttccagtggacttcttagttc 293
|||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 296 tgaggtcttgatctccttcaccgcaatactccttccagtggacttcttagttc 244
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2570
Number of Sequences: 1807
Number of extensions: 2570
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 572
length of database: 10,358,551
effective HSP length: 16
effective length of query: 556
effective length of database: 10,329,639
effective search space: 5743279284
effective search space used: 5743279284
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (99.9 bits)